Scientific publications

2017

Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinIONTM portable nanopore sequencer.
Benítez-Páez A, Sanz Y.
Gigascience. 2017 Jul;6(7):1-12. doi: 10.1093/gigascience/gix043.
PMID: 28605506

Bifidobacterium CECT 7765 modulates early stress-induced immune, neuroendocrine and behavioral alterations in mice.
Moya-Pérez A, Perez-Villalba A, Benítez-Páez A, Campillo I, Sanz Y.
Brain Behav Immun. 2017 Oct;65:43-56. doi: 10.1016/j.bbi.2017.05.011.
PMID: 28512033

Changes in the luminal environment of the colonic epithelial cells and physiopathological consequences.
Blachier F, Beaumont M, Andriamihaja M, Davila AM, Lan A, Grauso M, Armand L, Benamouzig R, Tomé D.
Am J Pathol. 2017 Mar; 187(3):476-486. doi: 10.1016/j.ajpath.2016.11.015.
PMID: 28082121

Gut microbiota, diet and obesity-related disorders - the good, the bad and the future challenges.
Portune KJ, Benítez-Páez A, Del Pulgar EM, Cerrudo V, Sanz Y.
Mol Nutr Food Res. 2017 Jan;61(1):1600252. doi: 10.1002/mnfr.201600252.
PMID: 27287778

2016

MyNewGut Special Issue: Unravelling the role of the gut microbiome in energy balance and brain development and function: the European project MyNewGut

Preface
Brigidi P, Sanz Y.
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.11.002.

Impact of dietary fiber and fat on gut microbiota re-modeling and metabolic health.
Benítez-Páez A, Gómez Del Pulgar EM, Kjølbæk L, Kirchner Brahe L, Astrup A, Hingstrup Larsen L, Sanz Y.
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.11.001.

Gut microbiota role in dietary protein metabolism and health-related outcomes: The two sides of the coin.
Portune K.J, Beaumont M, Davila A, Tomé DBlachier F, Sanz Y.
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.08.011.

Interplay between gut microbiota, its metabolites and human metabolism: Dissecting cause from consequence.
Hartstra A.V, Nieuwdorp M, Herrema H. 
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.08.009.

Metabolomics of fecal samples: A practical consideration.
Matysik S, Le Roy C, Gerhard L, Claus S.
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.05.011.

Microbiome and metabolic disorders related to obesity: Which lessons to learn from experimental models?
Neyrinck AM, Schüppel VL, Lockett T, Haller D, Delzenne NM.                                                                                                                                                                                                  
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.08.012.

Microbiota and lifestyle interactions through the lifespan.
Rampelli S, Candela M, Turroni S, Biagi E, Pflueger M, Wolters M, Ahrens W, Brigidi P.
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.03.003.

Role of microbiota during early life on child's neurodevelopment.
Cerdóa T, García-Valdésa L, Altmäeb S, Ruízd A, Suárezd A, Campoy C.
 
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.08.007.

Microbiome in brain function and mental health.
Kennedy PJ, Murphy A.B, Cryan JF, Ross PR, Dinan TG. 
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.05.001.

The human gut microbiome, diet, and health: “Post hoc non ergo propter hoc”.

Roeselers G, Bouwman J, Levin E.
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.08.010.

Insulin resistance as key factor for linking modulation of gut microbiome to health claims and dietary recommendations to tackle obesity.                              
Loman S, Van der Kamp JW.                                                                                                                                                                                                                                                                        
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.10.008.

Communication and impact through targeted channels and media.
Giordani A, Sadler C,
Fernández L.
                                                                                                                                                                                                                                                  
Trends Food Sci Technol. 2016 Nov; 57(part B). doi: 10.1016/j.tifs.2016.10.007.
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The role of microbiota and Intestinal permeability in the pathophysiology of autoimmune and neuroimmune processes with an emphasis on Inflammatory Bowel Disease, Type 1, Diabetes and Chronic Fatigue Syndrome.                                                                                                                                                                                                                         Morris G, Berk M, Carvalho AF, Caso JR, Sanz Y, Maes M.                                                                                                                                                                                                               Curr Pharm Des. 2016 Sep 14. [Epub ahead of print]                                                                                   

Intestinal dysbiosis, gut hyperpermeability and bacterial translocation: missing links between depression, obesity and type 2 diabetes?                                                      Slyepchenko A, Maes M, Machado-Veira R, Anderson G, Solmi M, Sanz Y, Berk M, Köhler CA, Carvalho AF.                                                                  
Curr Pharm Des. 2016 Sep 22. [Epub ahead of print]

The Role of the Microbial Metabolites Including Tryptophan Catabolites and Short Chain Fatty Acids in the Pathophysiology of Immune-Inflammatory and Neuroimmune Disease.

Morris G, Berk M, Carvalho A, Caso JR, Sanz Y, Walder K, Maes M.
Molecular Neurobiology. 2016 Jun 27. doi: 10.1007/s12035-016-0004-2.
PMID: 27349436.

The gut microbiota: a major player in the toxicity of environmental pollutants?

Claus S, Guillou H, Ellero-Simatos S.
Biofilms and Microbiomes. 2016 May 4. doi: 10.1038/npjbiofilms.2016.3. 

Genome structure of the symbiont Bifidobacterium pseudocatenulatum CECT 7765 and gene expression profiling in response to lactulose-derived oligosaccharides.
Benítez-Páez A, Moreno FJ, Sanz ML, Sanz Y.
Front Microbiol. 2016 Apr 29;7:624. doi: 10.3389/fmicb.2016.00624.
PMID: 27199952.

ViromeScan: a new tool for metagenomic viral community profiling.
Rampelli S, Soverini M, Turroni S, Quercia S, Biagi E, Brigidi P, Candela M.
BMC Genomics. 2016 March 1. doi: 10.1186/s12864-016-2446-3.
PMID: 26932765

Detrimental effects for colonocytes of an increased exposure to luminal hydrogen sulfide: The adaptive response.
Beaumont M, Andriamihaja M, Lan A, Khodorova N, Audebert M, Blouin JM, Grauso M, Lancha L, Benetti PH, Benamouzig R, Tome D, Bouillaud F, Davila AM, Blachier F.
Free Radic Biol Med. 2016 April. doi: 10.1016/j.freeradbiomed.2016.01.028.
PMID: 26849947.
 

Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.
Benítez-Páez A, Portune KJ, Sanz Y.
Gigascience. 2016 Jan 28;5:4. doi: 10.1186/s13742-016-0111-z.
PMID: 26823973.

Safety Assessment of Bacteroides uniformis CECT 7771 Isolated from Stools of Healthy Breast-Fed Infants.
Fernández-Murga ML, Sanz Y.
PLoS One. 2016 Jan 19;11(1):e0145503. doi: 10.1371/journal.pone.0145503. 
PMID: 26784747.

Bifidobacterium pseudocatenulatum CECT7765 induces an M2 anti-inflammatory transition in macrophages from patients with cirrhosis.
Moratalla A, Caparrós E, Juanola O, Portune K, Puig-Kröger A, Estrada L,Bellot P, Gómez-Hurtado I, Piñero P, Zapater P, González-Navajas JM, Such J, Sanz Y, Francés R.
Journal of Hepatology. 2016 Jan. doi: 10.1016/j.jhep.2015.08.020.
PMID: 26334579.
 

2015

Birth by Caesarean Section and the Risk of Adult Psychosis: A Population Based Cohort Study.
O'Neill SM, Curran EA, Dalman C, Kenny LC, Kearney PM, Clarke G, Cryan JF, Dinan TG, Khashan AS.
Schizophr Bull. 2015 Nov; 45 (3): 633-641. doi: 10.1093/schbul/sbv152.
PMID: 26615187.

Breaking down the barriers: the gut microbiome, intestinal permeability and stress-related psychiatric disorders.
Kelly JR, Kennedy PJ, Cryan JF, Dinan TG, Clarke G, Hyland NP.
Front Cell Neurosci. 2015 Oct; 9: 392. doi: 10.3389/fncell.2015.00392.
PMID: 26528128.  

Adult Hippocampal Neurogenesis Is Regulated by the Microbiome.
Ogbonnaya ES, Clarke G, Shanahan F, Dinan TG, Cryan JF, O'Leary OF.
Biological Psychiatry. 2015 Aug; 78(4). doi: 10.1016/j.biopsych.2014.12.023.
PMID: 25700599.

When ageing meets the blues: Are current antidepressants effective in depressed aged patients?
Felice D, O'Leary OF, Cryan JF, Dinan TG, Gardier AM, Sanchez C, David DJ.
Neuroscience and Behavioural Reviews. Aug 2015; 55:478-497. doi: 10.1016/j.neubiorev.2015.06.005.
PMID: 26054791.

Foodomics for personalized nutrition: how far are we?
Vimaleswaran KS, Le Roy CI, Claus SP.
Current Opinion in Food Science. 2015 Aug; 4:129-135. doi: 10.1016/j.cofs.2015.07.001.

The deleterious metabolic and genotoxic effects of the bacterial metabolite p-cresol on colonic epithelial cells.
Andriamihaja M, Lan A, Beaumont M, Audebert M, Wong X, Yamada K, Yin Y, Tomé D, Carrasco-Pozo C, Gotteland M, Kong X, Blachier F.
Free Radic Biol Med. 2015 Aug; 85:219-27. doi: 10.1016/j.freeradbiomed.2015.04.004.
PMID: 25881551

Gut microorganisms as promising targets for the management of type 2 diabetes.
Delzenne NM, Cani PD, Everhard A, Neyrinck AM, Bindels LB.
Diabetologia. 2015 July; 58 (10): 2206-2217.
PMID: 26224102

Microbiota and host determinants of behavioural phenotype in maternally separated mice.
De Palma G, Blennerhassett P, Lu J, Deng Y, Park AJ, Green W, Denou E, Silva MA, Santacruz A, Sanz Y, Surette MG, Verdu EF, Collins SM, Bercik P.
Nature Communications. 2015 July 28; 6: 7735. doi: 10.1038/ncomms8735.
PMID: 26218677.
 

Understanding the role of gut microbiome in metabolic disease risk.
Sanz Y, Olivares M, Moya-Pérez Á, Agostoni C.
Pediatr Res. 2015 Jan; 77(1-2):236-44. doi: 10.1038/pr.2014.170. Epub 2014 Oct 14.
PMID: 25314581.

Insights into the role of the microbiome in obesity and type 2 diabetes.
Hartstra AV, Bouter KE, Bäckhed F, Nieuwdorp M.
Diabetes Care. 2015 Jan; 38(1):159-65. doi: 10.2337/dc14-0769.
PMID: 25538312.

2014

Mammalian-microbial cometabolism of L-carnitine in the context of atherosclerosis.
Claus SP.
Cell Metab. 2014 Nov 4; 20(5):699-700. doi: 10.1016/j.cmet.2014.10.014.
Epub 2014 Nov 4.
PMID: 25440049.

Development of personalized functional foods needs metabolic profiling.
Claus SP.
Curr Opin Clin Nutr Metab Care. 2014 Nov; 17(6):567-73. doi: 10.1097/MCO.0000000000000107.
PMID: 25137506.

High protein diet modifies colonic microbiota and luminal environment but not colonocyte metabolism in the rat model: The increased luminal bulk connection.
Liu X, Blouin JM, Santacruz A, Lan A, Andriamihaja M, Wilkanowicz S, Benetti PH, Tome D, Sanz Y, Blachier F, Davilla AM.
American Journal of Physiology. 2014 June 26. doi: 10.1152/ajpgi.00400.2013
PMID: 24970777.